History

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Releases and events

  • (1995/12/21 Ruby language (0.95) was opened to public (fj.sources))
  • 2000/11/21 BioRuby project started
  • 2001/03/18 mailing list started
  • 2001/06/21 bioruby-0.1
  • 2001/07/19 ISMB/BOSC2001 lightning talk (Copenhagen)
  • 2001/10/24 bioruby-0.3 with CVS repository
  • 2001/11/17 1st offline meeting (banquet only) (Kyoto)
  • 2001/12/15 bioruby-0.3.3 released
  • 2002/01/26 BioHackathon (Arizona)
  • 2002/01/?? BioFetch server started
  • 2002/02/24 BioHackathon (Cape Town)
  • 2002/01/31 bioruby-0.3.4 released
  • 2002/03/11 bioruby-0.3.5 released
  • 2002/04/08 bioruby-0.3.6 released
  • 2002/06/09 bioruby-0.3.7 released
  • 2002/06/26 bioruby-0.3.8 released
  • 2002/07/30 bioruby-0.3.9 released
  • 2002/12/12 MBSJ2002 poster (Yokohama)
  • 2002/12/16 GIW2002 software demonstration (Ebisu, Tokyo)
  • 2003/01/28 bioruby-0.4.0 released
  • 2003/01/28 2nd Infobiologist Meeting 2003 @NIG talks (Mishima, Japan)
  • 2003/02/17 BioHackathon 2003 (Singapore)
  • 2003/06/25 bioruby-0.5.0 released
  • 2003/06/27 ISMB/BOSC2003 talks (Brisbane, Australia)
  • 2003/07/16 bioruby-0.5.1 released
  • 2003/08/22 bioruby-0.5.2 released
  • 2003/10/13 bioruby-0.5.3 released
  • 2003/12/10 MSBJ2003 poster (Kobe)
  • 2003/12/15 GIW2003 poster (Yokohama)
  • 2004/01/03 CVS repository @ Open-Bio
  • 2004/07/29 ISMB/BOSC2004 talks (Glasgow, UK)
  • 2004/08/24 bioruby-0.6.0 released
  • 2004/08/25 bioruby-0.6.1 released
  • 2004/12/13 bioruby-0.6.2 released
  • 2004/12/13 GIW2004 software demonstration (Yokohama)
  • 2004/12/13 Open Bio Japan BoF (Yokohama)
  • 2005/03/11 SIG-BMK/1st Open Bio Japan Workshop talks (JAIST)
  • (2005/06/14 chemruby.org started)
  • 2005/06/21 funded by IPA as Exploratory Software Project started
  • 2005/06/23 ISMB/BOSC2005 talks (Detroit)
  • 2005/07/09 4th Kansai Ruby Study Session talks (Kyoto)
  • 2005/07/17 kick-off meeting for IPA Exploratory Software Project (Tokyo)
  • 2005/08/24 bioruby-0.6.3 released
  • 2005/08/31 bioruby-0.6.4 released
  • 2005/10/12 Genome Information Utilization Workshop 2005 talks (Chiba, Japan)
  • 2005/12/08 MBSJ2005 poster (Fukuoka, Japan)
  • 2005/12/19 GIW2005 software demonstration (Yokohama)
  • 2005/12/19 2nd Open Bio Japan Workshop (Yokohama)
  • 2005/12/19 bioruby-0.7.0 released
  • 2006/01/20 bioruby-0.7.1 released
  • 2006/02/24 debrief session for IPA Exploratory Software Project (Tokyo)
  • 2006/02/27 bioruby-1.0.0 released (ChangeLog)
  • (2006/02/27 chemruby-1.0.0 released)
  • 2006/03/10 SIG-BMK/3rd Open Bio Japan Workshop (JAIST)
  • 2006/06/11 RubyKaigi2006 lightening talk (Tokyo)
  • 2006/08/04 BOSC2006 talks (Fortaleza, Brasil) (PDF)
  • 2006/12/11 Phyloinformatics Hackathon (Durham, NC)
  • 2006/12/25 bioruby-1.1.0-pre1 released
  • 2007/03/02 SIG-MBI/6th Open Bio Japan Workshop (JAIST)
  • 2007/03/03 bioruby-1.1.0-pre2 released
  • 2007/04/14 bioruby-1.1.0-pre3 released
  • 2007/06/29 bioruby-1.1.0-pre4 released
  • 2007/07/19 bioruby-1.1.0 released (ChangeLog)
  • 2007/07/19 BOSC2007 talks (by Toshiaki Katayama) (Vienna, Austria) (PDF)
  • 2007/12/15 bioruby-1.2.0 released (ChangeLog)
  • 2007/12/15 21st Kansai Ruby/Rails Study Session talk (Kobe)
  • 2007/12/30 bioruby-1.2.1 released (ChangeLog)
  • 2008/02/10 DBCLS BioHackathon2008 (Tokyo)
  • 2008/08/27 version control system moved from CVS to git
  • 2008/12/12 BMB2008 poster (Kobe)
  • 2009/02/24 bioruby-1.3.0 released (ChangeLog) (OBF News)
  • 2009/03/16 DBCLS BioHackathon2009 (Tokyo and Okinawa)
  • 2009/03/27 SIG-MBI/11th Open Bio Japan Workshop poster (JAIST)
  • 2009/05-08 Google Summer of Code 2009 with NESCent: PhyloXML support in BioRuby
  • 2009/09/02 bioruby-1.3.1 released (ChangeLog) (OBF Bews)
  • 2009/12/29 bioruby-1.4.0 released (Release Notes) (OBF News)
  • 2010/02/08 DBCLS BioHackathon2010 (Tokyo)
  • 2010/03/06 SIG-MBI/13th Open Bio Japan Workshop poster (JAIST)
  • 2010/05-08 Google Summer of Code 2010
  • 2010/07/10 BOSC2010 talk (by Raoul Bonnal) (Boston, MA)
  • 2010/08/25 BioRuby paper is published
  • 2010/09/16 BioSprint 2010 (Nairobi, Kenya)
  • 2010/10/18 BH10.10 (Shizuoka, Japan)
  • 2010/10/22 bioruby-1.4.1 released (Release Notes) (OBF Bews)
  • 2010/12/10 BMB2010 poster (Kobe, Japan)
  • 2010/12/13 JSBi 2010 talk (by Naohisa Goto) (Fukuoka, Japan)
  • 2010/12/24 BioRuby plugin system (Biogem) is released
  • 2011/05-08 Google Summer of Code 2011
  • 2011/07/15 BOSC2011 talk (by Raoul Bonnal) (Vienna, Austria)
  • 2011/07/18 RubyKaigi2011 lightning talk (by Naohisa Goto) (Tokyo)
  • 2011/07/30 http://biogems.info/ which lists all available biogems
  • 2011/08/21 NBDC / DBCLS BioHackathon 2011 (Kyoto)
  • 2011/08/26 bioruby-1.4.2 released (Release Notes) (OBF Bews)
  • 2012/02/12 Biogem paper is published
  • 2012/05-08 Google Summer of Code 2012
  • 2012/07/14 BOSC2012 talk (by Hiroyuki Mishima) (Long Beach, CA)
  • 2012/08/22 bioruby-1.4.3 released (Release Notes) (OBF Bews)